Chloroplast and photosynthetic pigments
Std 8–10 gave the basic idea of photosynthesis; here we study the chloroplast, light reaction, Calvin cycle, C4 and CAM in detail.
Like a solar panel, the chloroplast in a leaf traps light and makes food.
Photosynthesis = making carbohydrate (glucose) from CO₂ and H₂O with sunlight trapped by chlorophyll – the only process that turns solar energy into food.
In the figure : Chloroplast structure and pigments.
Rule 1 : Chloroplast structure — Chloroplasts lie mainly in leaf mesophyll cells; discoid; double membrane. Inside is the stroma holding lamellae; stacks of sacs = grana; each sac = thylakoid. Light reaction in the thylakoid membrane; dark reaction in the stroma.
- Easy : Grana = thylakoids stacked like coins.
- Medium : Stroma has enzymes, DNA, ribosomes.
- Exam-type (CET) : Light = granum; dark = stroma.
Rule 2 : Pigments — Chlorophyll a (-CH₃) and b (-CHO); molecule = porphyrin head + phytol tail. Carotenoids: carotenes (C₄₀H₅₆, orange-red) and xanthophylls (with oxygen, yellow). They pass absorbed energy to chlorophyll a and protect chlorophyll from photo-oxidation.
- Easy : Chl a = -CH₃; chl b = -CHO.
- Medium : Xanthophyll = contains oxygen.
- Exam-type (CET) : Pigments are fat-soluble.
a = -CH₃ (methyl), b = -CHO (aldehyde): ‘a-M, b-A’.
‘Dark reaction only in darkness’ is wrong (light-independent). Trap: ‘chlorophyll in stroma’ is wrong (thylakoid).
Memory clue : "Granum = stack of coins; thylakoid = each coin".
Spot the difference
| Part | What? | Role |
|---|---|---|
| Granum | Stack of thylakoids | Light reaction |
| Stroma | Ground substance | Dark reaction |
| Carotenoid | Accessory pigment | Energy + protection |
Practice questions
- 1Define photosynthesis.
- 2Where are chloroplasts?
- 3What is a granum?
- 4Chl a vs b.
- 5Role of carotenoids.
- 6What is phytol?
- 7Site of light reaction?
- 8Site of dark reaction?
Show answers (try them yourself first)
- 1Glucose from CO₂ + H₂O using light.
- 2In mesophyll cells.
- 3Stack of thylakoids.
- 4a: -CH₃; b: -CHO.
- 5Pass energy to chl a; protect.
- 6Long tail of chlorophyll.
- 7Thylakoid membrane.
- 8Stroma.
Nature of light and spectra
Leaves look green because they reflect green light and absorb blue and red.
Light = electromagnetic radiation; stream of photons / waves. Visible light is 390–730 nm. The absorption spectrum and action spectrum nearly coincide.
In the figure : Visible spectrum and the absorption curve.
Rule 1 : Light and the visible spectrum — By quantum theory light is a stream of photons; by wave theory, waves of different wavelengths = colours. We see 390–730 nm, between ultraviolet and infra-red. One photon carries one quantum of energy.
- Easy : Photon = particle of light.
- Medium : Visible lies between UV and IR.
- Exam-type (CET) : Shorter wavelength = more energy.
Rule 2 : Absorption and action spectra — Absorption spectrum: graph of light absorbed by pigments per wavelength. Action spectrum: rate of photosynthesis per wavelength. Chl a and b absorb blue, violet and red most, so the two graphs overlap. Carotenoids absorb the violet–blue region.
- Easy : Absorption = how much taken up; action = how much synthesis.
- Medium : The two graphs coincide.
- Exam-type (CET) : Green is reflected, so the leaf looks green.
Absorbs Blue, Violet, Red (BVR); green bounces back.
‘Most photosynthesis in green light’ is wrong (red/blue). Trap: absorption and action are not identical – they overlap but measure different things.
Memory clue : "Absorption = Amount absorbed; Action = Activity (rate)".
Spot the difference
| Point | Absorption spectrum | Action spectrum |
|---|---|---|
| Shows | Light absorbed | Rate of photosynthesis |
| Y-axis | Absorption | Rate |
Practice questions
- 1Visible-light wavelengths?
- 2What is a photon?
- 3Which colours does chlorophyll absorb?
- 4Why are leaves green?
- 5What is absorption spectrum?
- 6What is action spectrum?
- 7Do they coincide?
- 8What does chromatography show?
Show answers (try them yourself first)
- 1390–730 nm.
- 2Quantum particle of light.
- 3Blue, violet, red.
- 4Green light is reflected.
- 5Graph of absorption per wavelength.
- 6Graph of rate per wavelength.
- 7Yes, nearly.
- 8Green and yellow bands.
Experiments and overview of photosynthesis
Bubbles rising in a pond by day show that oxygen is being made.
Hill reaction: isolated chloroplasts release O₂ from water. The process has two stages: light reaction and dark reaction (Blackman).
In the figure : Overall equation and key experiments.
Rule 1 : Source of O₂: experiments — Van Niel: purple bacteria use H₂S and release sulphur → plants use H₂O and release O₂. Ruben (1941): used heavy oxygen ¹⁸O in Chlorella; the released O₂ came from water. Hill (1937): isolated chloroplasts + water + a ferric compound; ferric was reduced and O₂ released in light, proving photolysis of water.
- Easy : O₂ from water, not from CO₂.
- Medium : Hill reaction = O₂ without CO₂.
- Exam-type (CET) : ¹⁸O = tracer.
Rule 2 : Two reactions and the overall equation — Equation: 6CO₂ + 12H₂O → C₆H₁₂O₆ + 6O₂ + 6H₂O. Light reaction (granum): light → ATP + NADPH₂, O₂ released. Dark reaction (stroma): CO₂ → glucose using ATP and NADPH₂. Arnon: light energy is stored in ATP = photophosphorylation. The two occur in sequence.
- Easy : Light → ATP + NADPH₂ → dark.
- Medium : Water is oxidised; CO₂ is reduced.
- Exam-type (CET) : NADPH₂ = reducing power.
O₂ = Origin Of Water; sugar comes from CO₂.
‘O₂ from CO₂’ is wrong. Trap: ‘dark reaction needs light’ is wrong (needs ATP/NADPH₂).
Memory clue : "Hill = Hydrogen/oxygen from water".
Spot the difference
| Point | Light reaction | Dark reaction |
|---|---|---|
| Site | Granum | Stroma |
| Needs | Light, H₂O | CO₂, ATP, NADPH₂ |
| Output | ATP, NADPH₂, O₂ | Glucose |
Practice questions
- 1What did Van Niel propose?
- 2Ruben's experiment.
- 3What is Hill reaction?
- 4What is photolysis?
- 5Write the overall equation.
- 6Site of light reaction?
- 7Role of NADPH₂.
- 8Other name of dark reaction.
Show answers (try them yourself first)
- 1Plants use H₂O.
- 2¹⁸O showed O₂ comes from water.
- 3O₂ release by isolated chloroplasts.
- 4Splitting of water in light.
- 56CO₂ + 12H₂O → C₆H₁₂O₆ + 6O₂ + 6H₂O.
- 6Granum.
- 7Reducing power.
- 8Blackman's reaction.
Photosystems and the light reaction
Like water falling on a turbine, excited e⁻ run down a chain and make ATP.
Photosystem = light-harvesting pigments + a reaction centre (P680 / P700). Non-cyclic: PS II + PS I; Cyclic: PS I only.
In the figure : Z-scheme: two photosystems and electron flow.
Rule 1 : Photosystems — A photon lifts a chlorophyll electron to a higher level (excited state); without light it returns to the ground state. Antenna / light-harvesting molecules pass energy to the reaction centre. PS II = P680 (680 nm or below), PS I = P700 (700 nm or below). P = Pigment.
- Easy : PS II = P680; PS I = P700.
- Medium : Antenna = energy collectors.
- Exam-type (CET) : PS II acts first despite its name.
Rule 2 : Non-cyclic and cyclic — Non-cyclic: PS II electrons pass through the ETC to PS I; PS I electrons reduce NADP⁺ → NADPH₂. PS II refills electrons by photolysis: 4H₂O → 2H₂O + O₂ + 4H⁺ + 4e⁻. H⁺ builds up inside the thylakoid; flowing out to the stroma it drives ATP synthesis (chemiosmosis). Cyclic: electrons return to PS I; only ATP; no O₂ or NADPH₂.
- Easy : Non-cyclic = ATP + NADPH₂ + O₂.
- Medium : Cyclic = only ATP.
- Exam-type (CET) : H⁺ gradient powers ATP.
Non-cyclic: 3 products (ATP, NADPH₂, O₂); cyclic: 1 (ATP).
‘O₂ released in cyclic’ is wrong. Trap: ‘PS I acts first’ is wrong (PS II takes e⁻ from water).
Memory clue : "Non-cyclic = never returns; cyclic = comes back".
Spot the difference
| Point | Non-cyclic | Cyclic |
|---|---|---|
| Photosystem | II + I | I only |
| O₂ | Released | No |
| NADPH₂ | Formed | No |
Practice questions
- 1Where is P680?
- 2Where is P700?
- 3Role of antenna molecules?
- 4Photolysis equation.
- 5How is ATP made?
- 6NADPH₂ in cyclic?
- 7Final electron acceptor.
- 8What is photophosphorylation?
Show answers (try them yourself first)
- 1PS II.
- 2PS I.
- 3Pass energy to the reaction centre.
- 44H₂O → 2H₂O + O₂ + 4H⁺ + 4e⁻.
- 5By H⁺ gradient (chemiosmosis).
- 6Not formed.
- 7NADP⁺.
- 8ATP formation in light.
Dark reaction (Calvin cycle)
Give a factory raw material (CO₂) and fuel (ATP, NADPH₂) and it makes sugar.
Calvin cycle (C3): fixation of CO₂ and glucose formation in the stroma; first stable product is 3-PGA (3-carbon).
In the figure : Calvin cycle: carboxylation, reduction, regeneration.
Dark reaction (Calvin cycle)
In the app you can move this figure with your finger.
Open in the appRule 1 : Three steps — 1. Carboxylation: CO₂ + RuBP (5C, two phosphates) → unstable 6C → instantly 2 × 3-PGA; enzyme Rubisco. 2. Reduction (glycolytic reversal): PGA + ATP → 1,3-DPGA; with NADPH₂ → 3-PGAL. 3. Regeneration: 10 PGAL + 6 ATP → 6 RuBP.
- Easy : C3 = first product has 3 carbons.
- Medium : Rubisco is the most abundant enzyme.
- Exam-type (CET) : Calvin won the 1961 Nobel Prize.
Rule 2 : Count: one glucose — 6 CO₂ and 6 RuBP → 12 PGAL; 2 of them = one glucose; 10 = regenerate 6 RuBP. Hence 6 turns. Total 18 ATP + 12 NADPH₂. Calvin traced the path with Chlorella and radioactive ¹⁴CO₂. The cycle returns ADP and NADP⁺.
- Easy : 6 turns = 1 glucose.
- Medium : 12 PGAL: 2 + 10.
- Exam-type (CET) : ATP : NADPH₂ = 18 : 12.
C-R-R: Carboxylation, Reduction, Regeneration; 6 turns, 18 ATP, 12 NADPH₂.
‘All PGAL becomes glucose’ is wrong (only 2 of 12). Trap: ‘Calvin in the granum’ is wrong (stroma).
Memory clue : "RCR: Round (fix), Convert (reduce), Reform (regenerate)".
Spot the difference
| Step | What happens | ATP / NADPH₂ |
|---|---|---|
| Carboxylation | CO₂ + RuBP → PGA | None |
| Reduction | PGA → PGAL | ATP + NADPH₂ |
| Regeneration | PGAL → RuBP | ATP |
Practice questions
- 1What is RuBP?
- 2Role of Rubisco.
- 3First stable product?
- 4Turns for one glucose?
- 5Fate of 12 PGAL?
- 6ATP and NADPH₂ needed?
- 7Which alga did Calvin use?
- 8Where does it occur?
Show answers (try them yourself first)
- 15-carbon sugar with 2 phosphates.
- 2Joins CO₂ and RuBP.
- 33-PGA.
- 46.
- 52 → glucose; 10 → 6 RuBP.
- 618 ATP + 12 NADPH₂.
- 7Chlorella.
- 8Stroma.
Photorespiration, C4 pathway and CAM
On hot afternoons leaves close stomata, CO₂ drops and O₂ rises; plants then use special routes.
Photorespiration: in high O₂ Rubisco acts as an oxygenase; about 25% of fixed carbon is lost. C4: first product 4-carbon OAA; Kranz anatomy. CAM: CO₂ fixed at night; desert plants.
In the figure : Comparison of photorespiration, C4 and CAM.
Rule 1 : Photorespiration — Occurs in high temperature, bright light, high O₂ and low CO₂. RuBP + O₂ → PGA + 2C phosphoglycolate → glycolate → peroxisome (glycine) → mitochondria (serine + CO₂ released). Three organelles: chloroplast, peroxisome, mitochondria (PCO cycle). No ATP gain; a wasteful process.
- Easy : Rubisco = carboxylase + oxygenase.
- Medium : Occurs in C3; absent in C4.
- Exam-type (CET) : 25% carbon lost.
Rule 2 : C4 and CAM — C4 (Hatch-Slack): sugarcane, maize, sorghum. In the mesophyll CO₂ + PEP (PEP carboxylase) → OAA → malate → releases CO₂ in the bundle sheath → Calvin cycle. Kranz anatomy: large chloroplasts around the bundle sheath. C4 needs 30 ATP vs 18 for C3, but no photorespiration. CAM: stomata open at night, malate stored (acidification); CO₂ released by day (deacidification). E.g. Kalanchoe, Opuntia, Aloe.
- Easy : C4 first product = OAA (4C).
- Medium : CAM = CO₂ at night, Calvin by day.
- Exam-type (CET) : Kranz = wreath.
C3 = 3 (PGA); C4 = 4 (OAA); CAM = Cactus At Midnight.
‘C4 needs less ATP’ is wrong (30). Trap: ‘CAM stomata open by day’ is wrong (night).
Memory clue : "C4 = four carbons before Calvin; Kranz = ring".
Spot the difference
| Point | C3 | C4 | CAM |
|---|---|---|---|
| First product | PGA | OAA | OAA |
| ATP | 18 | 30 | 30 |
| Stomata | Day | Day | Night |
Practice questions
- 1When does photorespiration occur?
- 2Three organelles involved.
- 3Carbon lost?
- 4Example of C4.
- 5What is Kranz anatomy?
- 6Product of PEP carboxylase?
- 7Example of CAM.
- 8Why are C4 plants better?
Show answers (try them yourself first)
- 1High O₂, low CO₂, high temperature.
- 2Chloroplast, peroxisome, mitochondria.
- 3About 25%.
- 4Sugarcane, maize, sorghum.
- 5Wreath-like bundle sheath arrangement.
- 6OAA.
- 7Kalanchoe, Opuntia, Aloe.
- 8No photorespiration; work at low CO₂.
Factors affecting photosynthesis and significance
Seedlings on a dense forest floor grow slowly because little light reaches them.
Blackman's law of limiting factors: the rate is set by the slowest (minimum) factor. Factors: light, CO₂, temperature, water (external); chlorophyll, sugar buildup, leaf structure (internal).
In the figure : Factors and the limiting-factor graph.
Factors affecting photosynthesis and significance
In the app you can move this figure with your finger.
Open in the appRule 1 : External and internal factors — Light: red best, then blue; bright diffused light is best; very strong or very weak light lowers the rate. CO₂: 0.03% in air; up to 1% helps; more inhibits. Temperature: optimum 25–30 °C; Opuntia up to 55 °C. Water: indirect (turgidity). Internal: amount of chlorophyll; sugar buildup slows the rate; cuticle, stomata, intercellular spaces.
- Easy : Optimum temperature 25–30 °C.
- Medium : Water is a raw material but acts indirectly.
- Exam-type (CET) : Sugar accumulation slows the rate.
Rule 2 : Blackman's law and significance — E.g. at a fixed light a plant can use only 10 mg CO₂ per hour; raising CO₂ raises the rate until it stops – now light is limiting. Raise light and the rate climbs again. The curve shows a sharp bend and plateau. Significance: anabolic; source of food; solar → chemical energy; O₂ for respiration and the ozone layer; coal, petroleum, natural gas.
- Easy : Only one factor limits at a time.
- Medium : Plateau = another factor is limiting.
- Exam-type (CET) : O₂ = respiration + ozone.
Blackman = ‘weakest link of the chain’.
‘All factors together set the rate’ is wrong (the minimum factor). Trap: ‘more CO₂ is always better’ is wrong (inhibits beyond ~1%).
Memory clue : "Weakest link sets the rate".
Spot the difference
| Factor | Optimum / note |
|---|---|
| Light | Red > blue; bright diffuse |
| CO₂ | 0.03% → up to 1% |
| Temperature | 25–30 °C |
| Water | Indirect |
Practice questions
- 1Blackman's law.
- 2Colour with highest rate?
- 3Optimum temperature?
- 4CO₂ in air?
- 5Why a plateau?
- 6Why is water indirect?
- 7Two internal factors.
- 8Two uses of photosynthesis.
Show answers (try them yourself first)
- 1Minimum factor sets the rate.
- 2Red, then blue.
- 325–30 °C.
- 40.03%.
- 5Another factor is limiting.
- 6Maintains turgidity and hydration.
- 7Chlorophyll, sugar buildup.
- 8Food; O₂; fossil fuels.
Quick revision of the whole lesson
| Concept | Key fact |
|---|---|
| Chloroplast | Granum = light; stroma = dark |
| Light | 390–730 nm; action ≈ absorption |
| Experiments | Hill, Ruben: O₂ from water |
| Light reaction | PS II P680, PS I P700; ATP + NADPH₂ + O₂ |
| Calvin | 6 turns; 18 ATP + 12 NADPH₂ |
| C4 / CAM | OAA; Kranz; night stomata |
| Factors | Blackman: minimum factor |
🎯 Most important points for the exam
- Chloroplast and pigments.
- Absorption and action spectra.
- Hill and Ruben experiments.
- Cyclic and non-cyclic photophosphorylation.
- Calvin cycle arithmetic.
- C3 / C4 / CAM comparison.
- Blackman's law of limiting factors.
Understand the concept → draw the figure → memorise the key points → solve questions yourself.